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18                                                                                   IMR Annual Report 2020







              Molecular Thalassemia


              Molecular  tests  offered  for  the  diagnosis  of  thalassaemia  are  the  β  amplification  refractory
              mutation system (ARMS), β GAP, and ARMS variant for haemoglobin E (HbE) thalassaemia. The
              laboratory also offers additional panels for thalassaemia detection including:
     Cancer Research Centre  (CaRC)  •  α GAP
                 •
                   α ARMS
                 •
                   α and β Multiplex Ligation-dependent Probe Amplification (MLPA)
                   α-, β- and δ-sequencing
                 •
                 •
                   A few modifiers i.e., XMN-1 polymorphism and triplication alpha.



                                                                            TOTAL SAMPLES
                  TYPE OF TESTS        TESTS PERFORMED
                                                                      2019                   2020
                                       Peripheral blood film
                                       Capillary
                                       electrophoresis
                                       HPLC
                                                                      549                     138
                                       Gel electrophoresis
                     Hb Analysis       (alkaline)

                                       Gel electrophoresis
                                       (acid)
                                       Multiplex ARMS PCR             1016                    668

                                       Multiplex GAP PCR              1602                    219
                  Molecular tests for  MLPA                            129                    34
                     Beta Globin       Sequencing                      742                    303
                    Gene/Cluster
                                       Other variants                 650                     582

                                       Multiplex GAP PCR              2134                    625
                                       Multiplex ARMS PCR             1703                    577
                  Molecular tests for   MLPA                           315                    178
                 Alpha Globin Gene/
                       Cluster         Sequencing                     305                     144





              BCR-ABL1 Kinase Domain (KD) Mutation Test


              This test helps to identify BCR-ABL1 KD mutation in patients receiving tyrosine kinase inhibitors
              (TKIs) therapy, who do not achieve an optimal response and are apparently failing treatment.
              Identification of TKI resistance is important as the effect of some mutations can be overcome
              by increasing imatinib dosage, whereas others require switching to either a different (second-
              generation) TKI, or alternative therapy.
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